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Collection of R-scripts and functions for vaclab

Install

The following R-packages are needed:

   rJava
   xlsxjars
   xlsx    
   knitr   
   methods 
   bitops  
   RJSONIO 
   RCurl   
   R4CouchDB

To install bitops and RCurl one need to install

    zypper in gcc-c++ R-base-devel libcurl-devel 

A java installation is needed for xlsx. It turned out to be a good idea to

    zypper in java-1.7.0-openjdk java-1.7.0-openjdk-devel

followed by

    R CMD javareconf

in the directory /usr/lib/R/library. Afterwards (at least here) I could install the xlsx stuff.

r4vl

   cd /usr/local/lib 
   git clone github_or_gitlab/r4vl.git 

Thats it.

Task

The Tasks look like this:

  {
    "Action": "/usr/bin/Rscript",
    "Comment": "Berechnet die p_cal & u(p_cal)",
    "TaskName": "CE3_calculate",
    "Value": [
        "/usr/local/lib/r4vl/map.R",
        "scripts/analyse_CE3_YAMP.R"
    ]
   }