From 3b7fe2105678bc686996d91afbabf0f0cf65145a Mon Sep 17 00:00:00 2001
From: Nando Farchmin <nando.farchmin@gmail.com>
Date: Thu, 25 May 2023 17:21:55 +0200
Subject: [PATCH] Update tutorials for new structure
---
.../Tutorial 1 - Function Approximation.ipynb | 3 +--
app/tutorials/Tutorial 2 - Sensitivity Analysis.ipynb | 8 ++++++--
app/tutorials/Tutorial 3 - MCMC.ipynb | 11 +++++++----
app/tutorials/Tutorial 4 - Sampling.ipynb | 4 ++--
4 files changed, 16 insertions(+), 10 deletions(-)
diff --git a/app/tutorials/Tutorial 1 - Function Approximation.ipynb b/app/tutorials/Tutorial 1 - Function Approximation.ipynb
index 7395570..41a434f 100644
--- a/app/tutorials/Tutorial 1 - Function Approximation.ipynb
+++ b/app/tutorials/Tutorial 1 - Function Approximation.ipynb
@@ -16,10 +16,9 @@
"outputs": [],
"source": [
"import sys\n",
- "import os\n",
- "import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"import pythia as pt # see doc: www.pythia-uq.com\n",
+ "import matplotlib.pyplot as plt\n",
"\n",
"sys.path.append(\"../../src\")\n",
"from utils import Batman # local imports"
diff --git a/app/tutorials/Tutorial 2 - Sensitivity Analysis.ipynb b/app/tutorials/Tutorial 2 - Sensitivity Analysis.ipynb
index 0bc5b84..caf2609 100644
--- a/app/tutorials/Tutorial 2 - Sensitivity Analysis.ipynb
+++ b/app/tutorials/Tutorial 2 - Sensitivity Analysis.ipynb
@@ -15,9 +15,12 @@
"metadata": {},
"outputs": [],
"source": [
+ "import sys\n",
"import numpy as np\n",
"import pythia as pt # see doc: www.pythia-uq.com\n",
- "from utils import Sobol"
+ "\n",
+ "sys.path.append(\"../../src\")\n",
+ "from utils import Sobol # local imports"
]
},
{
@@ -42,7 +45,8 @@
"metadata": {},
"outputs": [],
"source": [
- "sobol = Sobol(np.array([1, 2, 3, 4]))\n",
+ "a = np.array([1, 2, 3, 4])\n",
+ "sobol = Sobol(a)\n",
"def target_function(y):\n",
" return sobol.eval(y)"
]
diff --git a/app/tutorials/Tutorial 3 - MCMC.ipynb b/app/tutorials/Tutorial 3 - MCMC.ipynb
index f2c7a20..8e23290 100644
--- a/app/tutorials/Tutorial 3 - MCMC.ipynb
+++ b/app/tutorials/Tutorial 3 - MCMC.ipynb
@@ -15,12 +15,15 @@
"metadata": {},
"outputs": [],
"source": [
+ "import sys\n",
"import numpy as np\n",
- "import matplotlib.pyplot as plt\n",
- "import matplotlib.cm as cmap\n",
"import pythia as pt # see doc: www.pythia-uq.com\n",
"import emcee\n",
- "from utils import Sine, Gaussian"
+ "import matplotlib.pyplot as plt\n",
+ "import matplotlib.cm as cmap\n",
+ "\n",
+ "sys.path.append(\"../../src\")\n",
+ "from utils import Sine, Gaussian # local imports"
]
},
{
@@ -60,7 +63,7 @@
"val = target_function(y)\n",
"fig, ax = plt.subplot_mosaic([[\"sine\"]], constrained_layout=True, figsize=(10, 5))\n",
"for j, valj in enumerate(val):\n",
- " ax[\"sine\"].plot(sine.points, valj, color=cmap.Greys((j+1)*20), label=f\"sample {j+1}\")\n",
+ " ax[\"sine\"].plot(sine.points, valj, color=cmap.tab20(j), label=f\"sample {j+1}\")\n",
" ax[\"sine\"].legend()\n",
"plt.show();"
]
diff --git a/app/tutorials/Tutorial 4 - Sampling.ipynb b/app/tutorials/Tutorial 4 - Sampling.ipynb
index ff1f1d0..5214b5e 100644
--- a/app/tutorials/Tutorial 4 - Sampling.ipynb
+++ b/app/tutorials/Tutorial 4 - Sampling.ipynb
@@ -16,9 +16,9 @@
"outputs": [],
"source": [
"import numpy as np\n",
+ "import pythia as pt # check doc: www.pythia-uq.com\n",
"import matplotlib.pyplot as plt\n",
- "import matplotlib.cm as cmap\n",
- "import pythia as pt # check doc: www.pythia-uq.com"
+ "import matplotlib.cm as cmap"
]
},
{
--
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